run_digiSND.py

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#!/usr/bin/env python
import atexit
firstEvent = 0
 
def pyExit():
       "nasty hack"
       # This is needed to bypass seg violation with exiting cpp digitization
       # Most likely related to file ownership.
       os.system('kill '+str(os.getpid()))
 
import resource
def mem_monitor():
 # Getting virtual memory size 
    pid = os.getpid()
    with open(os.path.join("/proc", str(pid), "status")) as f:
        lines = f.readlines()
    _vmsize = [l for l in lines if l.startswith("VmSize")][0]
    vmsize = int(_vmsize.split()[1])
    #Getting physical memory size  
    pmsize = resource.getrusage(resource.RUSAGE_SELF).ru_maxrss
    print("memory: virtuell = %5.2F MB  physical = %5.2F MB"%(vmsize/1.0E3,pmsize/1.0E3))
 
import ROOT,os,sys
import shipRoot_conf
import shipunit as u
 
shipRoot_conf.configure()
 
from argparse import ArgumentParser
parser = ArgumentParser()
parser.add_argument("-f", "--inputFile", dest="inputFile", help="single input file", required=True)
parser.add_argument("-g", "--geoFile", dest="geoFile", help="geofile", required=True)
parser.add_argument("-n", "--nEvents", dest="nEvents",  type=int, help="number of events to process", default=100000)
parser.add_argument("-ts", "--thresholdScifi", dest="ts", type=float, help="threshold energy for Scifi [p.e.]", default=3.5)
parser.add_argument("-ss", "--saturationScifi", dest="ss", type=float, help="saturation energy for Scifi [p.e.]", default=104.)
parser.add_argument("-tML", "--thresholdMufiL", dest="tml", type=float, help="threshold energy for Mufi large [p.e.]", default=0.0)
parser.add_argument("-tMS", "--thresholdMufiS", dest="tms", type=float, help="threshold energy for Mufi small [p.e.]", default=0.0)
parser.add_argument("-no-cls", "--noClusterScifi", action='store_true', help="do not make Scifi clusters")
parser.add_argument("-cpp", "--digiCPP", action='store_true', dest="FairTask_digi", help="perform digitization using DigiTaskSND")
parser.add_argument("-d", "--Debug", dest="debug", help="debug", default=False)
parser.add_argument("--copy-emulsion-points", action='store_true', help="Copy emulsion points from input file (potentially large file size!).")
 
options = parser.parse_args()
# rephrase the no-cluster flag
makeClusterScifi = not options.noClusterScifi
# -----Timer-------------
timer = ROOT.TStopwatch()
timer.Start()
 
# outfile should be in local directory
tmp     = options.inputFile.split('/')
outFile = tmp[len(tmp)-1].replace('.root','_dig.root')
if options.inputFile.find('/eos')==0:
   if options.FairTask_digi:
       options.inputFile = os.environ['EOSSHIP']+options.inputFile
   else:   
       os.system('xrdcp '+os.environ['EOSSHIP']+options.inputFile+' '+outFile)
else:
    if not options.FairTask_digi:
       os.system('cp '+options.inputFile+' '+outFile) 
    
# -----Create geometry----------------------------------------------
import shipLHC_conf as sndDet_conf
 
if options.geoFile.find('/eos')==0:
       options.geoFile = os.environ['EOSSHIP']+options.geoFile
import SndlhcGeo
snd_geo = SndlhcGeo.GeoInterface(options.geoFile)
 
# set digitization parameters for MuFilter
lsOfGlobals  = ROOT.gROOT.GetListOfGlobals()
scifiDet     = lsOfGlobals.FindObject('Scifi')
mufiDet      = lsOfGlobals.FindObject('MuFilter')
mufiDet.SetConfPar("MuFilter/DsAttenuationLength",350 * u.cm)       #  values between 300 cm and 400cm observed for H6 testbeam
mufiDet.SetConfPar("MuFilter/DsTAttenuationLength",700 * u.cm)      # top readout with mirror on bottom
mufiDet.SetConfPar("MuFilter/VandUpAttenuationLength",999 * u.cm)   # no significante attenuation observed for H6 testbeam
mufiDet.SetConfPar("MuFilter/DsSiPMcalibrationS",25.*1000.)         # in MC: 1.65 keV are about 41.2 qdc
mufiDet.SetConfPar("MuFilter/VandUpSiPMcalibration",25.*1000.);
mufiDet.SetConfPar("MuFilter/VandUpSiPMcalibrationS",25.*1000.);
mufiDet.SetConfPar("MuFilter/VandUpPropSpeed",12.5*u.cm/u.nanosecond);
mufiDet.SetConfPar("MuFilter/DsPropSpeed",14.3*u.cm/u.nanosecond);
scifiDet.SetConfPar("Scifi/nphe_min",options.ts)   # threshold
scifiDet.SetConfPar("Scifi/nphe_max",options.ss) # saturation
scifiDet.SetConfPar("Scifi/timeResol",150.*u.picosecond) # time resolution in ps
scifiDet.SetConfPar("MuFilter/timeResol",150.*u.picosecond) # time resolution in ps, first guess
# in MC productions generated before July 2022 Scifi signal speed is missing from the geofile
if scifiDet.GetConfParF("Scifi/signalSpeed")==0:
  scifiDet.SetConfPar("Scifi/signalSpeed", 15*u.cm/u.nanosecond)
 
 
# Fair digitization task
if options.FairTask_digi:
  run = ROOT.FairRunAna()
  ioman = ROOT.FairRootManager.Instance()
  ioman.RegisterInputObject('Scifi', snd_geo.modules['Scifi'])
  ioman.RegisterInputObject('MuFilter', snd_geo.modules['MuFilter'])
  # Don't use FairRoot's default event header settings
  run.SetEventHeaderPersistence(False)
  
  # Set input
  fileSource = ROOT.FairFileSource(options.inputFile)
  run.SetSource(fileSource)
  # Set output
  outfile = ROOT.FairRootFileSink(outFile.replace('.root','CPP.root'))
  run.SetSink(outfile)
 
  # Set number of events to process
  inRootFile = ROOT.TFile.Open(options.inputFile)
  inTree = inRootFile.Get('cbmsim')
  nEventsInFile = inTree.GetEntries()
  nEvents = min(nEventsInFile, options.nEvents)
 
  rtdb = run.GetRuntimeDb()
  DigiTask = ROOT.DigiTaskSND()
  DigiTask.withScifiClusters(makeClusterScifi)
  DigiTask.set_copy_emulsion_points(options.copy_emulsion_points)
  run.AddTask(DigiTask)
  run.Init()
  run.Run(firstEvent, nEvents)
 
# Digitization using python code SndlhcDigi
else:
  if options.copy_emulsion_points:
      print("ERROR: copying of emulsion points only configurable when using DigiTask")
 
 # import digi task
  import SndlhcDigi
  Sndlhc = SndlhcDigi.SndlhcDigi(outFile,makeClusterScifi)
  nEvents   = min(Sndlhc.sTree.GetEntries(),options.nEvents)
# main loop
  for iEvent in range(firstEvent, nEvents):
    if iEvent % 50000 == 0 or options.debug:
        print('event ', iEvent, nEvents - firstEvent)
    Sndlhc.iEvent = iEvent
    rc = Sndlhc.sTree.GetEvent(iEvent)
    Sndlhc.digitize()
    if makeClusterScifi:
       Sndlhc.clusterScifi()
 # memory monitoring
 # mem_monitor()
 
  # end loop over events
  Sndlhc.finish()
  
timer.Stop()
rtime = timer.RealTime()
ctime = timer.CpuTime()
print(' ') 
print("Real time ",rtime, " s, CPU time ",ctime,"s")
if options.FairTask_digi:
  atexit.register(pyExit)